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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1982.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 13428
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2007.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3283.5
Min RPKM: 118.4
Std RPKM: 515.4
Median RPKM: 858.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
3283.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
3229.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
2909.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
2344.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
2308.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
2211.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
2024.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
2007.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1902.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1886.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
1844.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1772.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1675.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1654.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
1628.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
1623.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1602.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
1597.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1570.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1569.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
1519.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
1501.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
1487.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
1483.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
1474.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
1443.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
1441.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1409.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
1384.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
1381.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
1375.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
1366.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
1346.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
1341.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
1336.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1330.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
1323.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1318.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1313.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
1307.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
1302.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1277.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1253.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
1229.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
1221.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
1217.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1215.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
1215.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
1213.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1207.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
1199.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
1187.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
1181.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
1175.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1167.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1154.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
1142.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
1131.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1126.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
1112.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
1102.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
1101.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
1090.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1083.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1066.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
1056.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
1054.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1050.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1046.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
1037.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
1036.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
1034.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
1026.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1022.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
1018.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
1015.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1013.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1006.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
1005.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
992.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
987.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
986.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
986.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
979.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
975.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
971.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
970.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
966.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
964.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
963.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
949.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
948.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
943.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
935.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
933.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
928.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
925.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
916.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
916.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
915.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
909.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
903.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
898.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
895.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
893.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
883.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
867.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
849.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
848.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
848.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
838.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
836.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
833.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
804.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
797.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
790.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
789.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
782.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
776.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
772.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
771.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
755.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
747.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
740.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
738.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
737.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
726.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
706.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
688.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
687.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
680.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
667.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
664.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
658.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
645.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
644.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
641.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
636.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
635.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
635.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
633.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
630.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
621.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
618.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
613.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
610.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
603.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
603.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
603.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
586.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
583.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
580.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
559.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
558.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
553.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
551.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
545.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
534.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
523.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
505.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
501.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
493.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
490.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
490.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
483.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
482.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
480.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
471.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
461.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
456.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
452.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
450.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
448.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
447.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
443.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
440.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
438.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
434.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
432.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
424.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
423.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
408.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
408.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
406.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
404.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
404.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
402.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
395.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
387.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
385.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
382.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
377.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
367.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
365.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
364.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
361.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
358.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
352.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
347.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
346.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
330.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
312.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
305.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
282.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
277.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
249.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
248.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
225.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
220.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
214.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
199.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
191.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
189.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
118.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.