Fields »
ABOUTMENU
HELP
NEWS
NDUFA4
COLON - Expression summary
RNA expressioni
HPA:49.6TPM
GTEx:48.2RPKM
FANTOM5:282.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 49.6
overview Male, age 54 Sample 1
TPM: 62
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 34.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 31.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 48.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 32.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 72.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 62.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 47.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 58.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 42.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 52.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 56.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 41.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 48.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 53.3
Samples: 149

Max RPKM: 82.6
Min RPKM: 25.0
Std RPKM: 8.9
Median RPKM: 52.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 82.6
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 75.9
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 75.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 72.8
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 72.4
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 71.1
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 68.6
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 68.1
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 67.6
GTEX-139UW-2326-SM-5KM1Y 60-69 years, male 67.5
Show all
Colon - Transverse
RPKM: 44.3
Samples: 196

Max RPKM: 77.2
Min RPKM: 23.4
Std RPKM: 9.8
Median RPKM: 43.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 77.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 75.9
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 73.5
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 68.9
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 68.3
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 65.1
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 65.0
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 64.7
GTEX-QMRM-1226-SM-447C6 50-59 years, male 64.7
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 63.7
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 282.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 254.2
FF:10014-101C5 62,83,84 years, mixed 282.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.