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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 438.4
Min RPKM: 185.4
Std RPKM: 48.9
Median RPKM: 271.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
438.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
378.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
376.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
369.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
367.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
366.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
363.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
362.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
349.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
348.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
345.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
343.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
343.4
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
341.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
336.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
333.2
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
323.9
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
322.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
320.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
318.5
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
318.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
316.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
316.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
314.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
313.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
307.3
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
306.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
305.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
304.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
302.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
300.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
299.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
298.3
GTEX-QV31-0126-SM-447BP
30-39 years, male
294.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
294.1
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
294.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
293.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
292.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
289.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
288.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
284.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
283.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
283.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
282.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
281.6
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
278.9
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
278.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
277.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
276.4
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
276.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
274.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
271.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
271.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
270.2
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
269.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
268.8
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
267.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
266.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
265.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
259.0
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
258.5
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
257.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
254.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
254.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
253.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
250.5
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
249.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
248.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
247.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
247.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
247.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
246.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
245.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
245.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
244.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
244.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
241.6
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
241.2
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
241.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
239.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
239.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
238.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
238.0
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
233.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
231.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
231.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
229.8
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
229.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
229.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
227.5
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
225.4
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
222.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
219.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
219.0
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
216.2
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
213.8
GTEX-13111-0126-SM-5EGHO
50-59 years, male
208.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
205.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
205.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
201.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
200.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
200.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
189.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
185.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.