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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 11752.4
Min RPKM: 48.7
Std RPKM: 1973.6
Median RPKM: 643.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
11752.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
6409.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
6364.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
6284.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
6257.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
5811.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
5562.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
5073.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
4931.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
4827.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
4608.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
4389.0
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
3828.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
3779.7
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
3727.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
3694.6
GTEX-PX3G-0926-SM-48U12
20-29 years, female
3580.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
3452.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
3313.3
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
2911.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
2825.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
2775.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
2510.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
2008.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
1850.5
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
1842.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
1693.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
1666.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
1525.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
1510.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
1508.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
1473.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
1274.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
1228.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
1215.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
1211.4
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
1156.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
1145.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
1138.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
1088.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
1042.6
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
1029.6
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
1014.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
906.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
905.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
823.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
796.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
720.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
694.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
685.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
644.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
644.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
641.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
639.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
619.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
617.8
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
579.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
575.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
567.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
562.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
539.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
523.4
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
510.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
505.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
498.1
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
474.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
467.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
462.8
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
427.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
402.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
399.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
393.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
376.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
355.3
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
350.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
337.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
334.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
304.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
285.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
282.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
274.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
271.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
271.1
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
268.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
250.2
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
228.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
204.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
191.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
183.5
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
178.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
165.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
159.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
153.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
149.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
144.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
141.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
139.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
134.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
127.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
126.0
GTEX-13111-0126-SM-5EGHO
50-59 years, male
118.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
85.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
74.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
48.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.