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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 775.4
Min RPKM: 5.2
Std RPKM: 118.0
Median RPKM: 51.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
775.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
612.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
450.1
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
429.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
428.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
311.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
298.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
284.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
263.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
261.6
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
239.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
223.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
188.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
183.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
175.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
164.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
161.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
159.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
157.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
155.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
150.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
145.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
135.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
129.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
126.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
119.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
112.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
107.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
103.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
99.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
94.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
86.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
82.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
80.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
76.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
72.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
70.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
68.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
68.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
67.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
66.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
65.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
65.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
64.8
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
64.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
62.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
61.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
61.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
60.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
59.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
58.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
58.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
58.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
55.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
55.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
53.0
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
52.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
51.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
51.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
48.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
48.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
47.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
47.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
46.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
45.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
45.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
44.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
44.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
42.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
42.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
40.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
40.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
39.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
39.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
39.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
39.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
38.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
38.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
37.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
36.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
36.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
36.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
36.4
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
36.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
35.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
35.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
35.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
34.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
33.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
31.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
30.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
29.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
27.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
26.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
26.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
26.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
25.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
25.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
22.5
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
21.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
21.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
21.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
20.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
19.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
19.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
18.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
17.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
16.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
15.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
14.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
14.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
12.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
12.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
9.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
9.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
6.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
5.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.