We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1678.5
Min RPKM: 47.5
Std RPKM: 334.0
Median RPKM: 379.7
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
1678.5
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
1541.6
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
1135.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
1132.2
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
1095.4
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
1056.7
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
1035.1
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
998.0
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
965.3
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
958.1
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
914.3
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
907.7
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
880.8
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
876.7
GTEX-ZTSS-0926-SM-59865
40-49 years, male
723.7
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
722.3
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
685.3
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
681.2
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
672.9
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
650.0
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
644.0
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
605.7
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
539.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
527.5
GTEX-1122O-1326-SM-5H11F
60-69 years, female
525.0
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
522.3
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
519.0
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
502.9
GTEX-1192X-2526-SM-59868
50-59 years, male
493.2
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
491.4
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
464.4
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
460.8
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
450.7
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
450.5
GTEX-13113-1226-SM-5EGHT
60-69 years, female
450.0
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
449.1
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
434.1
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
421.6
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
414.6
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
406.7
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
405.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
404.8
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
393.9
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
380.1
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
379.4
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
371.1
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
359.9
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
358.4
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
349.4
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
347.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
341.0
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
332.1
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
326.5
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
303.1
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
302.2
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
282.6
GTEX-13111-1426-SM-5DUW3
50-59 years, male
272.7
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
260.3
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
257.6
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
248.8
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
242.7
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
218.9
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
218.7
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
192.1
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
181.2
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
179.1
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
178.1
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
178.1
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
176.1
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
173.6
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
169.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
169.1
GTEX-117YX-0326-SM-5GICL
50-59 years, male
163.1
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
160.9
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
158.6
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
154.4
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
141.4
GTEX-13O61-1326-SM-5KM31
60-69 years, male
137.9
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
121.5
GTEX-111YS-1426-SM-5GID8
60-69 years, male
119.1
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
111.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
99.8
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
87.5
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
76.5
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
74.7
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
71.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
63.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
47.5
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.