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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 10.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 0
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 0.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 968.2
Min RPKM: 0.1
Std RPKM: 136.2
Median RPKM: 48.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
968.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
823.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
734.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
525.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
480.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
464.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
453.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
418.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
386.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
367.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
331.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
330.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
317.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
310.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
305.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
290.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
289.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
270.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
261.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
250.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
244.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
243.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
239.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
234.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
233.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
223.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
220.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
219.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
207.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
197.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
186.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
186.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
179.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
178.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
169.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
165.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
159.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
154.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
147.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
144.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
142.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
139.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
137.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
133.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
123.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
122.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
120.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
120.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
119.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
119.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
119.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
118.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
117.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
116.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
115.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
112.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
112.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
109.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
109.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
108.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
107.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
107.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
103.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
101.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
101.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
101.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
98.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
98.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
94.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
94.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
93.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
92.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
91.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
91.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
87.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
82.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
81.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
80.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
75.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
72.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
72.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
71.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
70.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
70.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
70.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
66.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
66.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
64.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
64.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
63.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
63.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
63.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
60.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
60.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
60.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
60.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
59.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
58.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
58.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
58.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
54.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
53.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
53.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
51.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
51.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
49.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
49.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
48.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
46.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
42.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
42.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
42.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
41.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
41.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
40.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
39.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
39.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
38.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
32.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
30.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
29.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
28.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
27.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
26.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
25.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
25.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
24.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
24.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
24.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
24.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
23.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
22.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
21.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
20.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
19.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
19.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
19.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
18.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
18.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
18.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
18.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
17.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
16.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
16.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
16.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
16.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
15.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
15.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
15.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
15.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
15.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
15.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
15.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
14.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
14.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
14.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
13.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
13.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
13.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
11.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
10.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
9.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
9.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
9.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
8.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
8.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
8.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
7.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
7.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
7.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
6.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
6.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
5.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
5.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
5.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
4.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
4.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
4.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
4.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
4.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
4.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
4.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
3.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
3.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
3.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
3.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
3.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
3.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
3.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
3.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
2.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
2.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
2.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
2.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
2.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
1.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
1.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
1.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
1.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
1.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
1.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
1.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
0.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
0.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
0.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
0.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
0.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
0.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
0.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
0.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
0.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
0.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.