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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 284.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 212.0
Min RPKM: 38.6
Std RPKM: 39.3
Median RPKM: 132.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
212.0
GTEX-X585-3026-SM-46MWF
50-59 years, male
202.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
188.6
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
185.4
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
183.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
183.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
182.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
180.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
178.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
173.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
172.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
169.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
168.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
167.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
166.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
163.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
163.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
162.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
162.6
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
161.5
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
161.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
160.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
158.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
158.4
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
158.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
158.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
155.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
155.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
153.7
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
153.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
151.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
149.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
149.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
148.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
148.4
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
148.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
147.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
147.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
146.5
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
146.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
146.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
144.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
142.8
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
142.8
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
142.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
142.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
139.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
139.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
139.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
137.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
137.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
137.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
137.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
136.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
135.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
135.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
133.7
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
132.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
131.8
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
131.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
129.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
128.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
128.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
126.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
124.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
124.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
122.8
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
122.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
121.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
120.0
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
119.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
119.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
118.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
116.0
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
112.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
110.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
109.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
106.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
106.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
101.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
101.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
98.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
96.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
96.4
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
94.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
94.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
91.9
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
91.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
90.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
86.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
84.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
83.3
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
80.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
79.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
77.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
77.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
76.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
76.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
76.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
75.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
74.0
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
70.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
65.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
65.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
61.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
56.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
55.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
54.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
54.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
51.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
49.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
47.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
44.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
38.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 120.5
Samples: 108
Max RPKM: 234.0
Min RPKM: 31.5
Std RPKM: 46.2
Median RPKM: 129.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
234.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
216.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
211.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
210.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
207.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
200.3
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
189.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
185.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
181.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
178.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
177.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
176.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
173.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
171.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
168.8
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
160.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
158.7
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
157.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
157.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
157.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
157.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
156.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
153.1
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
152.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
152.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
150.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
150.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
149.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
148.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
148.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
147.7
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
147.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
146.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
146.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
145.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
145.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
145.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
142.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
142.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
141.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
141.2
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
141.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
140.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
140.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
137.8
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
136.9
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
136.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
135.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
135.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
132.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
132.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
131.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
131.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
130.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
129.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
127.0
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
123.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
123.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
122.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
122.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
121.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
117.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
116.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
116.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
112.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
111.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
111.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
110.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
104.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
104.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
103.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
101.5
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
101.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
98.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
97.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
95.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
94.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
89.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
87.8
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
87.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
84.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
83.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
83.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
78.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
77.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
75.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
72.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
72.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
72.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
70.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
61.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
59.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
57.6
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
57.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
56.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
55.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
51.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
50.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
50.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
49.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
44.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
43.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
43.0
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
42.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
39.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
38.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
36.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
31.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.