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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 391.5
Min RPKM: 179.2
Std RPKM: 42.8
Median RPKM: 264.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
391.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
386.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
353.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
350.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
340.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
339.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
334.2
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
331.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
326.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
318.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
316.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
314.7
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
314.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
311.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
311.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
307.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
306.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
300.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
299.3
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
299.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
299.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
297.0
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
297.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
297.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
296.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
294.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
293.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
289.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
286.2
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
284.9
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
284.4
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
284.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
283.0
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
283.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
281.0
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
280.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
279.8
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
277.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
275.5
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
275.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
274.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
274.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
271.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
271.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
271.0
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
270.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
270.7
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
270.6
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
270.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
266.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
265.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
265.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
264.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
264.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
264.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
262.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
262.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
262.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
261.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
260.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
256.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
255.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
253.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
251.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
250.5
GTEX-QCQG-0226-SM-48U28
50-59 years, female
249.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
248.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
246.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
244.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
244.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
240.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
238.7
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
238.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
237.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
236.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
235.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
234.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
234.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
234.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
233.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
233.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
229.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
229.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
228.3
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
228.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
223.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
218.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
218.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
216.0
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
215.5
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
212.3
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
211.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
211.6
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
211.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
210.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
208.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
206.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
205.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
203.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
192.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
188.3
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
185.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
183.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
179.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.