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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 446.3
Min RPKM: 185.7
Std RPKM: 54.1
Median RPKM: 294.5
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
446.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
429.2
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
413.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
410.1
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
408.5
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
397.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
394.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
385.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
376.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
374.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
369.4
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
357.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
356.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
355.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
355.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
354.4
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
353.6
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
350.3
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
344.6
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
341.8
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
340.7
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
339.4
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
335.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
335.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
334.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
333.0
GTEX-11I78-1926-SM-59878
50-59 years, female
327.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
327.0
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
326.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
325.1
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
324.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
322.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
319.5
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
319.2
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
318.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
316.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
315.1
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
312.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
311.0
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
310.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
309.6
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
309.3
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
306.5
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
303.7
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
301.9
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
299.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
299.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
295.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
294.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
292.6
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
291.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
290.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
289.6
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
287.1
GTEX-P78B-1926-SM-3P616
40-49 years, female
286.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
286.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
285.1
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
284.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
284.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
284.5
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
283.2
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
281.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
281.1
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
279.2
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
278.6
GTEX-S32W-1226-SM-4AD67
50-59 years, female
277.8
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
277.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
277.0
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
276.4
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
276.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
273.9
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
273.6
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
272.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
265.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
263.1
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
262.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
253.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
247.1
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
246.2
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
240.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
238.1
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
237.7
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
237.0
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
234.8
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
233.8
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
233.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
232.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
229.3
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
225.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
223.3
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
220.5
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
220.0
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
218.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
215.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
203.1
GTEX-S341-0726-SM-4AD5R
40-49 years, female
201.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
185.7
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.