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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 348.2
Min RPKM: 69.2
Std RPKM: 38.4
Median RPKM: 130.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
348.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
276.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
242.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
230.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
197.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
192.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
190.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
189.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
185.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
183.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
182.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
182.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
182.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
175.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
174.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
170.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
168.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
168.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
166.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
165.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
164.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
161.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
160.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
160.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
160.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
159.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
158.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
158.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
157.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
156.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
154.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
149.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
148.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
147.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
147.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
145.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
145.0
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
144.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
142.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
142.7
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
142.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
141.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
139.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
139.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
138.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
138.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
138.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
137.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
136.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
135.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
134.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
134.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
134.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
133.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
132.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
131.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
131.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
131.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
130.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
130.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
130.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
129.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
129.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
129.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
129.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
128.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
128.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
127.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
126.4
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
126.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
125.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
124.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
124.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
123.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
122.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
122.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
122.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
122.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
121.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
120.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
118.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
118.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
118.6
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
117.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
117.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
117.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
117.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
116.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
116.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
116.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
115.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
115.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
111.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
110.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
109.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
108.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
108.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
107.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
106.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
105.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
105.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
104.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
103.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
102.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
102.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
100.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
100.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
98.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
97.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
96.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
95.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
90.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
77.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
76.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
70.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
70.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
69.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.