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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1165.9
Min RPKM: 38.1
Std RPKM: 243.2
Median RPKM: 240.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1165.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1114.0
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
864.4
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
845.5
GTEX-11I78-1926-SM-59878
50-59 years, female
823.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
779.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
703.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
697.4
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
691.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
686.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
632.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
631.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
621.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
604.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
594.6
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
588.9
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
577.9
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
570.9
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
565.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
553.6
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
545.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
479.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
475.6
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
469.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
463.8
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
451.3
GTEX-S32W-1226-SM-4AD67
50-59 years, female
447.7
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
398.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
388.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
377.8
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
370.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
365.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
355.6
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
351.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
348.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
337.2
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
330.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
328.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
325.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
319.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
305.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
299.7
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
285.7
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
280.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
256.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
254.0
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
250.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
247.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
240.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
230.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
227.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
226.0
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
223.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
210.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
205.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
194.0
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
190.9
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
187.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
186.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
179.8
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
178.1
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
175.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
164.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
162.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
159.7
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
156.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
141.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
134.1
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
130.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
129.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
129.1
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
127.2
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
125.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
125.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
124.4
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
123.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
120.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
114.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
113.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
112.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
112.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
110.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
99.8
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
99.2
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
99.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
96.5
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
91.1
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
85.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
80.3
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
77.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
73.6
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
73.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
72.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
59.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
54.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
40.9
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
38.1
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.