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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 18.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 0.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 0.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1460.7
Min RPKM: 4.2
Std RPKM: 130.6
Median RPKM: 47.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1460.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
691.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
672.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
359.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
320.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
312.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
305.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
295.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
285.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
261.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
254.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
249.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
221.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
220.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
214.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
205.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
205.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
204.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
186.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
183.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
182.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
181.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
175.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
173.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
170.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
169.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
165.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
163.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
163.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
162.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
156.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
154.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
153.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
151.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
149.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
148.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
144.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
135.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
134.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
134.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
132.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
128.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
127.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
122.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
122.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
118.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
114.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
112.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
110.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
110.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
108.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
107.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
105.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
104.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
101.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
100.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
99.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
99.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
98.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
90.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
89.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
85.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
85.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
83.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
83.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
82.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
80.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
79.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
78.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
77.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
76.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
75.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
75.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
75.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
72.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
72.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
70.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
68.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
68.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
67.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
66.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
65.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
65.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
64.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
64.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
64.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
63.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
63.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
61.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
61.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
60.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
59.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
59.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
58.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
56.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
55.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
53.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
53.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
53.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
53.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
51.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
51.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
50.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
50.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
49.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
49.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
47.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
46.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
46.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
46.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
45.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
45.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
44.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
44.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
44.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
43.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
43.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
42.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
42.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
42.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
41.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
41.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
41.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
40.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
40.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
39.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
39.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
39.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
38.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
38.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
38.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
38.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
37.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
37.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
37.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
37.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
37.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
36.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
36.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
35.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
33.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
32.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
32.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
31.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
31.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
30.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
30.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
30.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
29.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
29.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
29.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
29.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
28.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
28.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
28.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
28.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
28.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
28.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
27.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
27.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
27.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
27.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
26.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
25.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
25.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
25.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
24.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
23.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
23.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
23.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
22.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
22.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
22.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
21.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
21.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
20.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
20.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
20.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
20.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
18.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
18.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
18.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
18.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
18.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
17.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
16.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
16.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
15.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
14.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
14.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
14.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
14.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
14.6
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
14.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
14.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
14.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
13.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
13.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
12.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
11.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
10.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
10.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
10.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
10.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
9.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
9.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
9.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
9.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
8.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
7.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
6.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
5.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
4.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
4.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.