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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 754.3
Min RPKM: 4.3
Std RPKM: 182.1
Median RPKM: 128.6
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
754.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
710.5
GTEX-S341-1226-SM-4AD5S
40-49 years, female
693.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
643.4
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
566.7
GTEX-11I78-2026-SM-5987C
50-59 years, female
557.8
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
544.5
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
538.1
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
527.7
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
496.0
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
490.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
442.6
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
433.8
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
409.1
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
404.8
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
389.1
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
374.8
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
370.6
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
350.8
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
348.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
323.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
322.9
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
319.1
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
298.6
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
297.0
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
296.5
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
284.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
265.8
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
219.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
214.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
208.6
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
198.9
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
198.3
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
188.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
173.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
158.9
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
152.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
150.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
146.6
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
146.5
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
146.1
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
141.4
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
137.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
136.5
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
134.4
GTEX-QCQG-1226-SM-48U23
50-59 years, female
133.8
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
131.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
130.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
127.3
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
122.5
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
118.1
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
117.1
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
115.5
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
107.2
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
105.4
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
105.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
104.1
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
101.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
99.5
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
98.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
96.0
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
87.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
87.1
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
87.0
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
82.2
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
77.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
77.2
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
75.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
71.5
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
71.4
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
70.1
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
68.6
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
66.3
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
64.4
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
62.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
61.8
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
61.1
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
56.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
52.1
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
51.2
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
48.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
46.8
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
41.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
38.6
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
34.0
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
23.9
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
21.9
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
20.7
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
19.6
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
18.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
14.6
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
12.9
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
10.3
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
9.0
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
4.7
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
4.3
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.