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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 211.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 171.7
Min RPKM: 0.0
Std RPKM: 35.4
Median RPKM: 102.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
171.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
165.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
159.6
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
158.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
153.1
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
150.0
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
145.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
145.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
141.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
138.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
137.7
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
137.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
136.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
135.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
134.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
134.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
133.8
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
131.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
130.8
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
130.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
128.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
128.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
128.2
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
128.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
128.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
127.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
127.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
125.6
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
125.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
124.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
122.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
121.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
120.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
119.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
119.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
119.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
118.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
117.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
116.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
116.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
115.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
114.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
114.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
114.1
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
112.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
112.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
112.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
111.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
110.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
109.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
108.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
107.3
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
106.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
105.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
103.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
103.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
102.5
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
101.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
100.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
99.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
99.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
95.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
95.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
94.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
90.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
87.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
87.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
86.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
84.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
83.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
83.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
83.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
83.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
82.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
82.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
81.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
80.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
79.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
78.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
77.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
77.3
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
75.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
75.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
69.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
68.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
66.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
65.1
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
64.3
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
63.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
63.8
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
63.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
61.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
58.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
58.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
58.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
57.3
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
56.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
54.8
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
53.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
53.7
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
51.1
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
49.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
49.4
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
48.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
47.5
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
46.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
46.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
44.6
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
39.2
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
35.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
24.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
23.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
15.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
0.0
Show all
Brain - Frontal Cortex (BA9) RPKM: 116.2
Samples: 108
Max RPKM: 301.0
Min RPKM: 20.3
Std RPKM: 51.6
Median RPKM: 114.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
301.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
216.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
202.3
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
197.0
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
194.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
190.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
188.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
188.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
186.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
183.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
181.9
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
181.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
179.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
177.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
176.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
176.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
174.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
168.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
167.8
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
167.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
164.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
164.2
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
162.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
160.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
157.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
157.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
155.9
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
155.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
153.2
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
152.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
149.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
148.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
148.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
146.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
145.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
142.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
141.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
141.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
141.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
140.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
135.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
134.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
134.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
132.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
127.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
127.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
119.0
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
118.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
117.2
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
117.2
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
116.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
115.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
115.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
114.6
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
114.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
112.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
110.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
107.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
107.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
105.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
103.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
101.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
101.3
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
100.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
100.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
99.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
99.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
97.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
94.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
94.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
93.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
92.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
91.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
89.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
87.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
86.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
85.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
84.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
84.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
81.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
79.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
79.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
76.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
75.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
75.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
70.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
67.8
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
66.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
65.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
64.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
62.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
60.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
58.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
57.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
52.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
50.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
48.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
44.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
41.5
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
40.6
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
38.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
36.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
29.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
27.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
26.3
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
23.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
23.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
20.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.