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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 574.5
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 270.5
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 234
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 343.3
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 485.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 385.2
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 556.5
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 568.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 318.2
Min RPKM: 0.6
Std RPKM: 80.1
Median RPKM: 137.2
GTEX-RN64-1826-SM-48FDV
50-59 years, male
318.2
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
294.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
288.0
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
287.3
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
280.6
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
276.2
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
274.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
265.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
263.0
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
261.8
GTEX-1399T-0826-SM-5IFES
60-69 years, male
251.8
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
245.5
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
245.4
GTEX-YECK-1926-SM-4W21H
60-69 years, male
238.0
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
234.0
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
224.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
224.1
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
219.9
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
217.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
217.6
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
217.6
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
216.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
214.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
208.0
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
207.9
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
207.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
204.6
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
203.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
202.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
201.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
199.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
198.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
194.7
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
193.8
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
192.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
191.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
183.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
180.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
178.8
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
175.7
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
175.2
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
174.0
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
171.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
169.5
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
167.8
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
167.4
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
163.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
163.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
161.3
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
159.7
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
154.0
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
152.5
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
148.5
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
143.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
141.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
139.6
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
138.5
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
138.4
GTEX-11GSP-0626-SM-5986T
60-69 years, female
137.2
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
137.2
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
134.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
133.0
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
132.9
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
131.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
115.6
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
109.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
107.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
105.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
105.3
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
103.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
102.3
GTEX-11ZUS-2526-SM-59872
30-39 years, male
100.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
98.8
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
95.5
GTEX-13113-1326-SM-5GCOI
60-69 years, female
94.4
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
93.4
GTEX-Q734-0326-SM-48U15
40-49 years, female
90.0
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
88.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
86.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
83.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
81.7
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
79.2
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
78.7
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
77.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
73.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
72.1
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
70.1
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
67.4
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
67.0
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
64.0
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
64.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
63.9
GTEX-REY6-1226-SM-48FDR
60-69 years, male
63.7
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
59.5
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
59.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
57.7
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
56.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
52.3
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
48.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
44.7
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
43.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
42.3
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
40.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
39.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
36.6
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
35.4
GTEX-S33H-1626-SM-4AD68
30-39 years, male
33.9
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
32.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
31.8
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
27.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
21.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
21.9
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
14.4
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
11.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
10.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
10.6
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
7.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
1.9
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
0.6
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
