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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 209.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 149.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 80.2
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 344.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 312.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 205.5
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 108.7
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 202.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 230.8
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 445.0
Min RPKM: 56.5
Std RPKM: 78.1
Median RPKM: 238.8
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
445.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
421.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
421.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
409.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
404.2
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
396.4
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
381.8
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
377.8
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
375.9
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
371.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
358.8
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
352.6
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
349.3
GTEX-13112-0226-SM-5P9IV
50-59 years, male
348.0
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
335.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
332.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
325.2
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
322.9
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
322.7
GTEX-Y111-2426-SM-4TT23
50-59 years, male
317.5
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
317.2
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
316.0
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
315.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
313.2
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
309.7
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
306.4
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
304.7
GTEX-S95S-1126-SM-4B64E
60-69 years, male
303.4
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
301.5
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
301.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
299.8
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
298.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
297.2
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
295.8
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
291.2
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
288.8
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
288.3
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
287.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
287.4
GTEX-11OF3-1826-SM-5987N
60-69 years, male
287.2
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
284.8
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
284.6
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
283.9
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
281.4
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
280.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
279.8
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
278.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
277.7
GTEX-11DXZ-2126-SM-59881
50-59 years, male
276.0
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
275.1
GTEX-12696-0226-SM-5EGL3
60-69 years, male
274.7
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
274.7
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
273.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
272.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
271.8
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
271.5
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
265.7
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
264.8
GTEX-V955-1926-SM-4KL1L
60-69 years, male
263.2
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
262.4
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
262.1
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
259.0
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
258.9
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
258.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
255.3
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
254.7
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
254.6
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
254.5
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
254.3
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
251.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
251.2
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
249.3
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
248.9
GTEX-13111-1526-SM-5EGJX
50-59 years, male
248.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
247.2
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
246.3
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
246.3
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
245.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
245.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
245.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
244.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
243.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
243.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
242.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
241.2
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
239.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
237.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
237.6
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
236.5
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
235.1
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
234.9
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
233.8
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
232.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
231.6
GTEX-R55D-0126-SM-48FEL
50-59 years, male
229.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
227.1
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
226.6
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
223.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
216.7
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
216.2
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
216.2
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
215.4
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
214.7
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
213.0
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
208.2
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
208.1
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
207.9
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
207.6
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
206.7
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
206.5
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
205.6
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
205.2
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
204.9
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
203.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
202.1
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
202.1
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
198.6
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
198.2
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
197.9
GTEX-R55C-1426-SM-48FED
40-49 years, male
197.2
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
196.8
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
194.4
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
189.4
GTEX-XPT6-1626-SM-4B655
20-29 years, male
189.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
188.5
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
188.2
GTEX-QLQW-1026-SM-447A9
30-39 years, male
186.5
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
181.1
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
181.1
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
180.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
177.7
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
177.6
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
174.9
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
173.6
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
171.5
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
169.1
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
168.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
166.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
161.8
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
159.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
159.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
154.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
153.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
152.3
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
151.4
GTEX-X261-2326-SM-4PQYU
50-59 years, male
150.0
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
148.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
148.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
145.4
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
138.5
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
135.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
134.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
132.7
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
127.6
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
127.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
126.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
119.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
119.9
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
113.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
109.6
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
103.8
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
103.4
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
102.6
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
101.4
GTEX-S33H-0126-SM-4AD62
30-39 years, male
96.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
93.2
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
91.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
87.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
82.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
81.1
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
62.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
56.5
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.