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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 284.2
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 241.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 187
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 283.8
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 304.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 210.3
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 208.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 347
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 289.9
Min RPKM: 6.8
Std RPKM: 57.0
Median RPKM: 88.5
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
289.9
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
246.0
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
243.3
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
242.9
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
236.5
GTEX-Q734-0326-SM-48U15
40-49 years, female
229.6
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
220.8
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
193.6
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
192.8
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
192.3
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
191.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
187.4
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
186.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
181.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
178.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
173.8
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
173.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
166.1
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
161.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
159.6
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
158.1
GTEX-P78B-1326-SM-3P611
40-49 years, female
157.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
153.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
153.1
GTEX-QESD-2026-SM-447BI
20-29 years, male
152.7
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
150.7
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
149.5
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
149.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
146.1
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
145.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
139.6
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
139.4
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
136.5
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
135.4
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
129.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
126.8
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
125.0
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
122.2
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
120.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
119.3
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
119.1
GTEX-1399T-0826-SM-5IFES
60-69 years, male
117.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
116.2
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
113.2
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
111.0
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
110.9
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
102.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
102.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
101.3
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
98.1
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
95.4
GTEX-11GSP-0626-SM-5986T
60-69 years, female
94.9
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
94.1
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
94.0
GTEX-X261-1726-SM-4PQYT
50-59 years, male
92.7
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
91.8
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
89.6
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
89.4
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
88.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
88.5
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
88.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
87.7
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
86.1
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
85.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
85.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
83.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
83.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
81.4
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
80.8
GTEX-YECK-1926-SM-4W21H
60-69 years, male
79.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
78.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
77.7
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
77.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
76.5
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
74.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
73.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
71.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
70.5
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
70.3
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
69.9
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
69.5
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
68.7
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
64.7
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
64.2
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
63.8
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
61.6
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
61.5
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
60.5
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
59.1
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
58.9
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
58.5
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
58.4
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
58.2
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
57.0
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
56.3
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
55.8
GTEX-13112-1426-SM-5EGH8
50-59 years, male
49.9
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
49.9
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
49.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
49.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
47.4
GTEX-11ZUS-2526-SM-59872
30-39 years, male
47.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
46.4
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
45.1
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
45.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
44.2
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
44.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
43.9
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
40.7
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
39.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
39.1
GTEX-RN64-1826-SM-48FDV
50-59 years, male
38.4
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
36.8
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
36.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
34.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
32.5
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
31.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
30.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
6.8
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.