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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1163.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 177.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 99.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1756.0
Min RPKM: 0.1
Std RPKM: 350.6
Median RPKM: 147.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1756.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
1635.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1568.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1535.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
1402.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1402.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1191.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
1168.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1068.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1036.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
975.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
971.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
953.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
921.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
868.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
845.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
810.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
760.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
741.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
734.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
731.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
730.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
721.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
699.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
695.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
681.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
677.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
663.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
612.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
602.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
599.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
594.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
566.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
541.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
541.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
539.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
537.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
535.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
534.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
515.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
513.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
498.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
498.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
479.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
470.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
468.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
463.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
460.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
452.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
441.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
431.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
419.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
414.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
398.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
396.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
395.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
390.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
385.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
378.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
377.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
369.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
367.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
362.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
360.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
356.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
353.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
345.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
341.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
341.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
326.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
322.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
309.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
306.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
305.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
296.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
294.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
293.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
281.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
275.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
273.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
255.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
251.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
249.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
248.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
244.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
244.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
238.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
233.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
210.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
203.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
203.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
201.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
195.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
189.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
183.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
177.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
173.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
173.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
165.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
162.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
158.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
154.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
153.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
153.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
152.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
150.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
148.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
146.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
143.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
142.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
140.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
138.3
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
137.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
128.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
127.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
124.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
116.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
111.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
110.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
109.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
108.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
101.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
98.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
97.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
82.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
70.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
64.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
64.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
56.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
52.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
26.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
25.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
25.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
19.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
18.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
11.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
10.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
9.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
5.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
4.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
4.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
4.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
4.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
3.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
3.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
3.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
3.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
2.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
2.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
2.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
2.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
2.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
2.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
2.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
2.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
2.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
2.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
2.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
2.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
2.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
2.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
2.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
2.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
2.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
1.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
1.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
1.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
1.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
1.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
1.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
1.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
1.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
1.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
1.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
1.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
1.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
1.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
1.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
1.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
1.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
1.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
1.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
1.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
1.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
1.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
1.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
1.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
1.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
1.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
1.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
1.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
0.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
0.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
0.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
0.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
0.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
0.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
0.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
0.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
0.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
0.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
0.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
0.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
0.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
0.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
0.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
0.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
0.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.