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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 172.9
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 812.4
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 102.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 101.6
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 828.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 150
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 55.6
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 85.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 560.5
Min RPKM: 26.7
Std RPKM: 99.7
Median RPKM: 134.7
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
560.5
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
474.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
454.0
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
396.2
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
391.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
384.1
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
343.4
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
341.2
GTEX-11GSP-0626-SM-5986T
60-69 years, female
308.9
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
305.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
305.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
301.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
298.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
296.3
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
283.2
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
281.7
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
276.0
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
268.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
260.7
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
253.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
250.0
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
221.6
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
216.1
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
215.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
201.0
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
199.2
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
197.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
194.8
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
193.6
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
193.1
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
189.7
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
182.3
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
181.0
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
180.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
180.1
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
180.1
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
173.9
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
173.0
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
172.9
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
171.6
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
169.0
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
159.2
GTEX-R53T-0326-SM-48FEC
50-59 years, female
158.4
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
158.3
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
157.0
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
154.8
GTEX-YECK-1926-SM-4W21H
60-69 years, male
154.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
148.8
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
147.3
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
146.4
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
146.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
145.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
144.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
142.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
142.3
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
142.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
141.4
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
136.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
134.8
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
134.7
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
133.7
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
132.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
129.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
128.5
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
127.1
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
124.6
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
121.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
121.3
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
120.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
120.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
117.2
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
115.8
GTEX-REY6-1226-SM-48FDR
60-69 years, male
114.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
112.9
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
110.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
109.2
GTEX-13113-1326-SM-5GCOI
60-69 years, female
104.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
101.7
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
98.4
GTEX-1399T-0826-SM-5IFES
60-69 years, male
96.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
96.2
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
93.2
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
92.5
GTEX-QEL4-1226-SM-447A4
50-59 years, male
91.1
GTEX-Q734-0326-SM-48U15
40-49 years, female
90.3
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
88.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
87.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
87.5
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
84.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
84.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
84.8
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
83.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
83.2
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
82.7
GTEX-P78B-1326-SM-3P611
40-49 years, female
81.4
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
78.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
77.6
GTEX-S32W-1926-SM-4AD63
50-59 years, female
77.2
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
76.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
74.8
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
74.4
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
71.6
GTEX-13112-1426-SM-5EGH8
50-59 years, male
69.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
68.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
61.7
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
60.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
58.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
53.5
GTEX-RU72-1426-SM-46MUF
50-59 years, female
51.9
GTEX-11ZUS-2526-SM-59872
30-39 years, male
51.5
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
49.1
GTEX-X261-1726-SM-4PQYT
50-59 years, male
44.8
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
41.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
40.7
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
39.8
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
39.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
34.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
32.7
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
26.7
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
