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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4558.3
Min RPKM: 0.7
Std RPKM: 1205.7
Median RPKM: 1298.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
4558.3
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
4532.3
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
4456.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
4028.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
3751.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
3654.5
GTEX-S341-1226-SM-4AD5S
40-49 years, female
3572.7
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
3377.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
3031.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
3022.0
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
2870.4
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
2849.0
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
2771.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
2737.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
2721.9
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
2647.8
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
2631.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
2593.1
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
2541.6
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
2358.3
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
2298.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
2243.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
2196.3
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
2148.6
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
2135.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
2119.7
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
2076.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
2056.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
2050.6
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
2030.7
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
1945.3
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
1928.6
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
1912.8
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
1853.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
1829.3
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
1827.0
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
1740.5
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
1617.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
1617.0
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
1613.0
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
1555.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
1554.0
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
1533.5
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
1518.1
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
1472.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
1431.6
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
1329.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
1304.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
1291.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
1259.8
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
1214.7
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
1178.8
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
1178.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
1166.8
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
1115.9
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
1102.1
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
1028.7
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
996.2
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
940.1
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
909.2
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
879.7
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
754.9
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
754.6
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
741.3
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
725.8
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
700.5
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
599.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
470.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
453.5
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
411.1
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
380.0
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
208.0
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
139.2
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
125.0
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
31.5
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
31.2
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
23.3
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
8.0
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
8.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
7.8
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
4.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
4.5
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
3.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
2.9
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
2.2
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
2.0
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
1.9
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
1.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
1.8
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
1.5
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
1.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
1.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
1.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
1.0
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
0.9
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.7
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.