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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 511.0
Min RPKM: 101.0
Std RPKM: 88.0
Median RPKM: 247.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
511.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
500.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
471.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
451.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
445.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
425.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
416.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
404.3
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
403.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
398.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
392.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
384.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
376.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
373.1
GTEX-X585-1826-SM-4QAS3
50-59 years, male
364.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
363.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
353.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
352.8
GTEX-QV31-0126-SM-447BP
30-39 years, male
352.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
350.8
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
346.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
342.1
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
338.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
332.9
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
326.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
322.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
313.8
GTEX-144GN-2126-SM-5O99D
50-59 years, male
311.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
309.0
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
308.0
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
307.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
300.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
298.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
296.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
293.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
289.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
288.8
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
276.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
273.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
273.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
269.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
267.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
266.9
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
264.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
260.4
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
258.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
258.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
256.3
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
254.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
252.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
250.5
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
248.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
247.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
246.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
243.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
239.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
239.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
238.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
236.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
234.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
233.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
231.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
231.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
231.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
226.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
223.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
221.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
218.5
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
217.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
217.1
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
214.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
213.1
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
211.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
208.9
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
207.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
206.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
205.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
204.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
201.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
199.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
197.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
189.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
189.1
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
182.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
180.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
178.5
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
172.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
169.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
168.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
165.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
163.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
163.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
161.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
159.4
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
156.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
154.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
154.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
154.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
149.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
146.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
145.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
144.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
116.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
101.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.