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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 243.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 107.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 81.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 662.7
Min RPKM: 29.0
Std RPKM: 79.9
Median RPKM: 143.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
662.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
533.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
525.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
370.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
328.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
320.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
315.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
311.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
299.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
295.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
282.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
276.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
271.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
265.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
262.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
257.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
257.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
255.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
248.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
244.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
244.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
243.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
243.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
241.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
237.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
235.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
234.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
232.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
232.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
230.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
227.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
225.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
219.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
218.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
216.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
214.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
213.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
211.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
208.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
208.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
207.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
206.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
206.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
206.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
204.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
203.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
203.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
202.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
201.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
199.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
199.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
199.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
198.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
198.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
195.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
194.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
194.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
192.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
187.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
186.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
185.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
185.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
185.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
184.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
183.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
182.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
182.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
182.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
181.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
181.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
180.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
179.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
176.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
176.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
176.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
175.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
174.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
170.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
170.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
169.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
168.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
167.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
165.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
165.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
165.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
164.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
163.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
161.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
161.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
161.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
160.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
158.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
156.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
155.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
155.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
155.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
151.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
150.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
150.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
148.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
147.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
147.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
147.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
146.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
144.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
143.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
143.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
143.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
142.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
142.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
142.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
141.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
140.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
140.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
140.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
138.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
138.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
138.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
137.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
136.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
136.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
134.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
133.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
131.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
131.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
131.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
130.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
130.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
129.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
129.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
128.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
126.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
124.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
124.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
124.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
124.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
123.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
123.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
121.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
121.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
120.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
120.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
120.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
119.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
118.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
118.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
118.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
117.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
117.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
116.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
116.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
115.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
115.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
115.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
114.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
114.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
113.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
113.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
112.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
112.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
111.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
111.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
110.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
108.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
107.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
107.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
105.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
105.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
103.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
102.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
102.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
99.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
98.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
96.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
96.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
95.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
95.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
93.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
91.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
91.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
90.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
90.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
89.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
88.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
87.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
86.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
85.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
85.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
83.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
83.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
81.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
81.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
81.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
77.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
76.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
74.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
74.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
71.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
70.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
67.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
66.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
66.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
65.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
57.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
56.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
56.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
51.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
51.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
51.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
51.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
50.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
47.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
31.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
29.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.