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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 189.5
Min RPKM: 53.1
Std RPKM: 31.9
Median RPKM: 99.4
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
189.5
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
183.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
182.6
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
182.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
181.6
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
177.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
171.7
GTEX-11I78-2026-SM-5987C
50-59 years, female
169.3
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
156.7
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
151.2
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
150.9
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
148.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
146.0
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
144.8
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
144.5
GTEX-QCQG-1226-SM-48U23
50-59 years, female
142.8
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
140.9
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
140.4
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
139.5
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
134.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
129.7
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
128.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
126.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
125.4
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
123.0
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
122.2
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
121.9
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
121.4
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
119.4
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
118.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
118.3
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
116.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
114.2
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
114.2
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
113.2
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
111.9
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
110.3
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
110.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
109.7
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
108.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
108.4
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
108.0
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
105.6
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
105.5
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
104.8
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
104.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
100.2
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
100.1
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
98.8
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
98.2
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
96.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
95.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
94.9
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
93.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
93.1
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
92.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
92.2
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
92.0
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
89.4
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
89.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
88.9
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
88.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
87.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
86.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
86.3
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
85.3
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
84.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
84.4
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
83.5
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
83.4
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
83.4
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
83.3
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
83.1
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
82.1
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
82.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
81.8
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
81.5
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
81.3
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
81.1
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
81.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
81.0
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
79.1
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
78.2
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
76.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
75.1
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
74.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
74.8
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
74.4
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
71.5
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
70.9
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
69.5
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
68.9
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
66.6
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
63.7
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
62.4
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
53.1
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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