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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 289.2
Min RPKM: 119.0
Std RPKM: 33.1
Median RPKM: 181.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
289.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
263.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
257.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
250.3
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
245.5
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
245.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
240.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
240.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
238.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
237.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
236.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
235.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
235.0
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
234.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
231.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
230.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
226.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
224.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
222.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
219.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
218.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
217.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
215.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
214.3
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
212.1
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
212.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
211.6
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
210.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
209.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
209.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
207.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
203.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
201.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
200.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
198.6
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
198.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
196.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
196.0
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
195.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
195.1
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
192.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
191.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
191.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
191.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
191.2
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
188.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
187.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
184.3
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
184.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
183.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
183.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
182.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
181.8
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
181.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
181.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
180.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
180.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
179.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
178.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
178.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
177.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
177.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
176.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
176.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
176.8
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
176.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
176.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
174.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
174.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
171.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
170.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
170.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
170.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
169.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
167.4
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
167.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
166.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
165.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
164.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
164.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
163.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
162.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
162.2
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
161.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
160.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
160.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
160.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
159.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
159.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
154.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
150.0
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
148.7
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
146.7
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
143.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
142.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
141.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
140.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
139.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
138.6
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
138.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
138.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
136.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
134.3
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
119.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.