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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 973.1
Min RPKM: 7.8
Std RPKM: 210.8
Median RPKM: 160.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
973.1
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
846.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
799.2
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
784.6
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
774.5
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
696.8
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
663.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
633.3
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
615.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
530.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
457.8
GTEX-11I78-1926-SM-59878
50-59 years, female
454.9
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
441.4
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
438.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
404.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
388.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
354.2
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
349.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
349.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
345.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
340.3
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
329.5
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
328.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
315.5
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
311.2
GTEX-S341-0726-SM-4AD5R
40-49 years, female
303.0
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
279.7
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
269.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
257.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
246.1
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
243.4
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
229.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
228.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
219.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
218.1
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
214.5
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
212.5
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
207.2
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
203.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
193.3
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
189.8
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
188.6
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
181.4
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
174.7
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
172.8
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
172.2
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
168.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
165.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
160.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
156.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
156.2
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
148.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
134.6
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
134.1
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
133.2
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
129.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
122.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
119.2
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
118.2
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
109.8
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
103.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
99.8
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
99.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
95.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
87.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
84.3
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
83.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
80.5
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
80.0
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
79.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
78.8
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
78.2
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
77.6
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
75.6
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
74.5
GTEX-QCQG-1426-SM-48U22
50-59 years, female
73.4
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
68.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
64.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
60.0
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
58.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
46.8
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
46.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
43.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
35.6
GTEX-RU72-2226-SM-46MUE
50-59 years, female
35.3
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
33.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
31.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
31.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
30.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
30.4
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
19.0
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
14.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
14.5
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
13.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
13.7
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
12.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
7.8
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.