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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 297.8
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 180.6
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 133.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 194.6
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 239.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 117.4
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 155.5
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 270.2
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 148.4
Min RPKM: 5.0
Std RPKM: 29.3
Median RPKM: 73.2
GTEX-R53T-0326-SM-48FEC
50-59 years, female
148.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
147.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
131.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
122.9
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
116.6
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
115.5
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
113.7
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
113.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
112.1
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
109.2
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
108.3
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
107.1
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
106.6
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
104.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
104.3
GTEX-1399T-0826-SM-5IFES
60-69 years, male
103.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
102.9
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
100.5
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
100.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
99.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
98.9
GTEX-YECK-1926-SM-4W21H
60-69 years, male
98.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
96.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
96.3
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
94.9
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
93.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
93.3
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
93.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
93.0
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
91.8
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
91.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
91.3
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
91.0
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
90.1
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
89.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
87.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
86.8
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
85.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
85.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
84.8
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
84.2
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
83.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
83.3
GTEX-13112-1426-SM-5EGH8
50-59 years, male
83.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
82.6
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
82.2
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
81.4
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
80.5
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
80.1
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
80.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
80.0
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
78.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
77.9
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
75.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
75.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
74.6
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
74.5
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
74.5
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
74.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
73.2
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
72.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
72.1
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
71.8
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
71.4
GTEX-Q734-0326-SM-48U15
40-49 years, female
70.3
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
69.3
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
68.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
68.1
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
67.3
GTEX-P78B-1326-SM-3P611
40-49 years, female
66.6
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
65.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
64.9
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
64.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
64.1
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
63.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
62.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
59.9
GTEX-X261-1726-SM-4PQYT
50-59 years, male
59.9
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
59.6
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
59.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
58.0
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
57.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
57.4
GTEX-11GSP-0626-SM-5986T
60-69 years, female
57.3
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
54.5
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
53.9
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
48.4
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
48.4
GTEX-13113-1326-SM-5GCOI
60-69 years, female
48.3
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
48.2
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
48.1
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
46.8
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
46.3
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
45.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
44.4
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
41.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
41.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
40.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
38.5
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
36.3
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
35.7
GTEX-QEL4-1226-SM-447A4
50-59 years, male
35.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
35.1
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
34.1
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
32.9
GTEX-REY6-1226-SM-48FDR
60-69 years, male
32.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
32.4
GTEX-12696-0826-SM-5EGGE
60-69 years, male
32.0
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
30.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
30.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
28.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
27.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
23.9
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
23.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
22.7
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
14.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
11.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
8.9
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
5.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.