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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1493.3
Min RPKM: 318.1
Std RPKM: 260.2
Median RPKM: 640.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
1493.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
1432.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
1390.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
1335.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
1314.1
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
1255.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
1198.3
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
1134.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
1078.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
1051.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
1004.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
989.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
974.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
960.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
954.7
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
940.4
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
939.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
936.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
935.6
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
934.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
920.8
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
906.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
894.7
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
880.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
837.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
837.7
GTEX-QV31-0126-SM-447BP
30-39 years, male
830.0
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
830.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
810.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
796.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
794.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
792.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
785.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
784.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
768.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
755.8
GTEX-R55G-0226-SM-48FEI
40-49 years, female
734.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
730.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
718.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
704.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
703.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
702.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
700.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
693.2
GTEX-QLQW-0126-SM-447BK
30-39 years, male
677.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
655.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
655.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
648.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
646.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
644.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
642.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
642.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
639.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
635.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
624.7
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
618.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
617.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
617.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
616.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
616.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
614.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
613.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
612.6
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
598.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
587.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
579.1
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
577.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
570.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
566.5
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
566.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
565.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
562.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
558.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
551.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
541.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
538.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
535.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
512.2
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
507.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
505.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
496.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
476.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
475.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
464.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
463.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
459.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
426.5
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
422.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
408.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
403.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
402.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
401.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
397.7
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
391.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
383.9
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
381.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
368.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
363.8
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
360.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
358.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
354.8
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
345.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
332.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
318.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.