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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1056.9
Min RPKM: 107.6
Std RPKM: 165.9
Median RPKM: 255.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1056.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
734.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
717.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
654.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
645.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
611.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
563.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
559.0
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
556.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
535.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
470.4
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
469.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
468.6
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
465.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
453.7
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
451.5
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
449.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
442.6
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
435.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
434.5
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
430.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
427.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
423.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
412.9
GTEX-QCQG-1426-SM-48U22
50-59 years, female
403.4
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
400.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
380.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
370.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
361.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
356.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
351.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
350.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
349.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
344.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
337.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
336.7
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
333.6
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
333.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
321.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
312.5
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
310.8
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
310.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
309.6
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
303.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
289.4
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
286.3
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
284.0
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
270.4
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
255.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
251.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
245.3
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
240.7
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
238.5
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
235.1
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
227.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
225.6
GTEX-11I78-1926-SM-59878
50-59 years, female
220.7
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
220.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
213.6
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
209.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
207.2
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
206.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
205.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
203.7
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
203.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
199.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
193.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
192.1
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
187.7
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
185.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
183.1
GTEX-P78B-1926-SM-3P616
40-49 years, female
179.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
179.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
178.0
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
175.0
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
171.9
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
165.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
164.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
163.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
159.3
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
159.1
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
158.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
154.8
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
153.9
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
153.5
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
152.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
151.0
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
150.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
145.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
135.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
130.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
124.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
116.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
114.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
112.9
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
111.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
107.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.