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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 30
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 32
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 9.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 521.1
Min RPKM: 16.2
Std RPKM: 58.5
Median RPKM: 89.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
521.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
347.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
285.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
273.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
223.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
223.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
212.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
210.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
209.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
206.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
204.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
203.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
202.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
201.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
197.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
182.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
174.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
173.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
167.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
165.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
164.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
161.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
160.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
160.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
157.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
155.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
151.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
150.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
150.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
149.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
148.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
148.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
147.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
145.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
145.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
144.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
143.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
141.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
141.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
140.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
140.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
138.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
137.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
136.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
135.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
135.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
133.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
133.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
132.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
132.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
132.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
131.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
130.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
126.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
125.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
124.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
122.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
119.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
118.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
118.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
116.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
115.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
115.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
114.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
114.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
114.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
114.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
113.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
112.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
111.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
111.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
110.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
109.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
108.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
108.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
108.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
107.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
107.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
106.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
105.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
104.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
104.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
104.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
103.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
103.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
102.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
102.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
102.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
102.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
100.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
99.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
98.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
98.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
98.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
97.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
96.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
96.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
96.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
96.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
96.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
95.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
95.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
92.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
91.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
91.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
89.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
89.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
88.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
88.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
88.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
88.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
87.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
87.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
87.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
86.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
85.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
83.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
83.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
81.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
81.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
79.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
79.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
79.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
79.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
79.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
78.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
78.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
77.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
77.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
76.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
76.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
76.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
75.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
74.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
74.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
74.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
74.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
74.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
73.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
73.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
73.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
73.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
72.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
71.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
70.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
70.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
69.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
69.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
68.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
68.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
68.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
67.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
67.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
67.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
66.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
66.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
65.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
65.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
64.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
64.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
64.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
63.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
62.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
61.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
60.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
60.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
59.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
59.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
59.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
58.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
58.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
58.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
57.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
57.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
57.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
57.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
56.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
55.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
54.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
53.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
53.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
52.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
51.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
51.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
49.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
48.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
48.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
48.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
47.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
46.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
46.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
45.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
45.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
43.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
41.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
41.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
40.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
40.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
40.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
39.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
39.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
35.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
35.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
32.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
31.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
31.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
30.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
24.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
22.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
22.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
22.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
20.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
18.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
16.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.