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ATL3
COLON - Expression summary
RNA expressioni
HPA:14.4TPM
GTEx:15.9RPKM
FANTOM5:68.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 14.4
overview Male, age 54 Sample 1
TPM: 18.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 17
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 18.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 17.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 16.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 15.9
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 19.8
Samples: 149

Max RPKM: 39.2
Min RPKM: 9.6
Std RPKM: 4.5
Median RPKM: 19.1
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 39.2
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 37.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 31.6
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 31.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 31.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 29.5
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 29.4
GTEX-1122O-1426-SM-5H11R 60-69 years, female 29.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 28.9
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 28.4
Show all
Colon - Transverse
RPKM: 12.8
Samples: 196

Max RPKM: 33.4
Min RPKM: 3.9
Std RPKM: 5.8
Median RPKM: 11.2
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 33.4
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 32.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 28.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 28.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 27.9
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 27.1
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 27.0
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 25.6
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 24.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 24.1
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 68.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 68.3
FF:10014-101C5 62,83,84 years, mixed 68.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.