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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 131.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 272.4
Min RPKM: 53.0
Std RPKM: 47.6
Median RPKM: 175.6
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
272.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
261.4
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
257.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
249.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
241.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
236.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
234.5
GTEX-X585-3026-SM-46MWF
50-59 years, male
234.3
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
232.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
229.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
229.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
228.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
224.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
222.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
221.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
216.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
215.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
215.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
215.3
GTEX-145MF-2726-SM-5O995
50-59 years, male
215.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
214.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
212.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
211.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
211.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
206.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
206.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
205.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
202.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
202.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
202.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
202.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
200.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
198.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
197.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
196.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
195.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
195.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
195.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
195.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
195.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
194.7
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
191.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
191.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
190.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
190.3
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
190.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
188.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
185.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
181.7
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
180.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
179.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
179.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
178.7
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
178.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
177.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
177.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
176.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
174.9
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
172.5
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
171.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
169.5
GTEX-1128S-2726-SM-5H12C
60-69 years, female
169.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
168.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
167.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
167.1
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
165.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
165.2
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
164.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
163.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
163.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
160.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
159.9
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
159.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
154.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
152.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
150.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
150.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
150.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
145.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
144.1
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
143.9
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
142.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
142.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
137.4
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
135.2
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
129.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
129.0
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
128.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
127.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
126.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
124.3
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
122.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
121.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
119.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
114.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
113.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
111.2
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
110.8
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
105.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
104.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
103.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
98.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
93.3
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
93.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
91.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
91.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
90.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
87.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
87.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
86.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
84.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
84.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
56.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
53.0
Show all
Brain - Frontal Cortex (BA9) RPKM: 167.3
Samples: 108
Max RPKM: 299.2
Min RPKM: 59.0
Std RPKM: 58.5
Median RPKM: 177.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
299.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
295.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
281.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
261.8
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
260.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
259.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
258.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
256.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
255.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
254.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
243.8
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
237.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
235.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
233.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
223.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
222.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
222.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
221.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
221.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
221.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
219.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
218.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
217.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
214.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
212.9
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
211.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
209.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
209.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
204.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
201.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
201.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
200.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
199.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
198.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
198.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
196.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
194.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
193.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
193.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
192.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
191.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
191.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
190.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
190.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
189.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
189.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
188.8
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
188.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
187.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
186.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
183.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
179.3
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
179.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
178.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
177.4
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
176.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
175.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
168.2
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
165.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
162.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
161.2
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
159.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
159.2
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
155.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
155.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
154.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
151.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
151.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
150.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
149.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
146.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
142.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
137.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
136.5
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
136.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
134.6
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
133.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
132.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
130.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
128.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
120.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
114.3
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
112.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
110.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
109.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
105.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
100.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
99.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
98.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
93.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
93.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
93.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
91.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
87.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
84.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
83.5
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
82.8
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
82.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
80.9
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
80.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
79.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
77.3
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
71.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
71.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
68.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
62.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
61.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
59.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.