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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 25.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 4.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 595.9
Min RPKM: 9.1
Std RPKM: 79.6
Median RPKM: 93.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
595.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
439.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
376.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
352.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
343.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
324.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
291.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
287.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
279.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
269.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
264.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
263.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
263.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
261.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
246.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
238.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
235.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
234.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
234.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
229.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
219.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
215.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
211.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
204.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
195.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
194.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
193.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
193.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
193.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
190.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
186.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
183.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
182.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
181.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
177.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
174.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
169.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
167.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
163.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
162.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
161.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
161.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
158.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
155.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
150.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
149.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
149.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
146.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
145.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
144.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
143.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
142.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
142.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
139.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
136.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
134.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
133.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
129.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
129.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
126.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
126.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
126.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
125.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
124.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
123.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
123.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
121.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
119.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
118.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
118.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
115.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
115.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
115.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
114.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
114.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
114.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
113.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
113.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
112.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
111.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
110.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
109.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
109.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
109.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
109.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
108.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
107.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
107.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
107.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
107.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
106.3
GTEX-1192X-2326-SM-5987X
50-59 years, male
104.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
103.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
102.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
102.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
100.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
99.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
99.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
98.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
97.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
96.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
96.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
95.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
95.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
94.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
94.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
93.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
93.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
92.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
92.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
91.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
90.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
90.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
90.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
89.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
89.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
89.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
88.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
88.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
88.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
88.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
85.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
85.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
84.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
84.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
83.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
83.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
83.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
82.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
81.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
80.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
79.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
77.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
77.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
76.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
76.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
75.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
74.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
74.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
74.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
73.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
73.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
72.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
72.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
72.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
71.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
71.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
70.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
69.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
69.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
68.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
67.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
66.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
65.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
65.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
63.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
62.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
62.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
61.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
60.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
59.1
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
58.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
58.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
57.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
57.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
56.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
56.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
55.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
54.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
54.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
53.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
53.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
52.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
52.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
51.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
51.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
51.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
50.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
49.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
48.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
48.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
48.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
46.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
46.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
46.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
45.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
43.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
43.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
41.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
41.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
41.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
41.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
40.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
40.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
40.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
39.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
38.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
36.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
31.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
31.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
29.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
29.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
29.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
28.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
27.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
26.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
25.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
24.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
23.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
23.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
21.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
21.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
16.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
9.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.