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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 755.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 921.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1093.9
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 732.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 867.9
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 745.5
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 200.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 293.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 247.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 654.8
Min RPKM: 257.4
Std RPKM: 64.6
Median RPKM: 374.1
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
654.8
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
580.7
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
568.2
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
566.5
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
552.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
513.8
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
511.6
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
500.4
GTEX-XPT6-1626-SM-4B655
20-29 years, male
494.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
492.5
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
477.8
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
476.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
468.7
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
464.3
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
460.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
455.9
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
453.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
453.5
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
451.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
449.4
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
448.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
447.8
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
445.1
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
441.3
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
440.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
435.5
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
434.0
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
432.9
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
432.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
430.9
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
426.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
425.3
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
423.2
GTEX-QLQW-1026-SM-447A9
30-39 years, male
422.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
422.7
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
422.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
420.9
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
419.9
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
419.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
414.6
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
413.7
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
411.4
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
410.8
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
410.4
GTEX-13112-0226-SM-5P9IV
50-59 years, male
408.8
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
408.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
405.1
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
402.6
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
402.2
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
401.8
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
401.3
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
401.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
400.6
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
400.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
399.5
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
398.8
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
395.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
395.1
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
394.8
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
392.5
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
392.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
392.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
391.8
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
391.6
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
391.2
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
390.3
GTEX-RN64-2326-SM-48FDW
50-59 years, male
389.0
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
387.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
384.9
GTEX-11DXZ-2126-SM-59881
50-59 years, male
384.7
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
384.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
383.9
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
383.1
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
383.0
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
381.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
381.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
381.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
379.7
GTEX-117XS-2026-SM-5GID1
60-69 years, male
379.6
GTEX-X261-2326-SM-4PQYU
50-59 years, male
379.5
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
379.3
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
377.5
GTEX-R55C-1426-SM-48FED
40-49 years, male
375.9
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
375.9
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
375.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
374.9
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
373.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
372.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
372.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
371.7
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
370.9
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
370.5
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
369.8
GTEX-13111-1526-SM-5EGJX
50-59 years, male
369.8
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
369.6
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
369.1
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
369.1
GTEX-REY6-0126-SM-48FDT
60-69 years, male
368.3
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
365.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
364.2
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
363.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
363.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
363.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
361.2
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
361.1
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
360.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
359.1
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
359.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
358.6
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
356.8
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
354.7
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
354.7
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
353.8
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
353.6
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
352.8
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
351.8
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
348.6
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
348.0
GTEX-Y111-2426-SM-4TT23
50-59 years, male
347.2
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
346.2
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
345.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
345.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
345.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
343.4
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
341.5
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
341.1
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
339.4
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
337.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
333.7
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
333.3
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
332.7
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
332.6
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
330.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
328.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
328.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
326.9
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
325.7
GTEX-R55D-0126-SM-48FEL
50-59 years, male
325.5
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
324.9
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
322.3
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
321.0
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
320.0
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
319.3
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
319.0
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
318.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
317.3
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
313.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
312.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
312.5
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
310.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
310.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
308.9
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
307.8
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
306.5
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
305.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
301.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
301.1
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
298.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
294.7
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
286.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
285.1
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
284.0
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
281.3
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
280.4
GTEX-11OF3-1826-SM-5987N
60-69 years, male
276.0
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
275.4
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
274.4
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
272.6
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
270.2
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
262.9
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
259.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
257.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.