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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1161.8
Min RPKM: 372.0
Std RPKM: 170.0
Median RPKM: 699.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
1161.8
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
1147.7
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
1146.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
1102.6
GTEX-PX3G-0926-SM-48U12
20-29 years, female
1084.7
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
1040.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
1036.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
1028.3
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
1001.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
981.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
979.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
968.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
952.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
942.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
931.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
927.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
916.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
906.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
898.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
895.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
892.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
871.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
862.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
860.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
849.6
GTEX-QCQG-0226-SM-48U28
50-59 years, female
848.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
837.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
817.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
802.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
799.7
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
786.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
771.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
763.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
760.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
759.3
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
754.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
742.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
742.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
741.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
739.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
731.0
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
728.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
724.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
718.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
709.4
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
708.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
707.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
707.3
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
705.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
704.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
703.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
700.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
698.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
697.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
695.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
691.4
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
690.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
688.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
682.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
673.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
671.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
667.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
665.3
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
665.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
661.4
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
658.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
657.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
655.3
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
653.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
641.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
639.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
637.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
636.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
634.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
632.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
626.5
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
626.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
617.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
613.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
604.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
603.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
596.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
590.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
586.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
584.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
581.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
575.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
568.0
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
567.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
558.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
550.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
544.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
542.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
527.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
521.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
513.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
500.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
483.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
476.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
468.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
467.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
459.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
440.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
372.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.