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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 680.8
Min RPKM: 82.2
Std RPKM: 120.7
Median RPKM: 294.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
680.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
675.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
548.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
533.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
513.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
511.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
499.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
468.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
466.5
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
447.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
438.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
412.0
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
409.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
403.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
402.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
394.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
391.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
377.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
367.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
366.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
356.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
353.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
353.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
351.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
348.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
347.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
346.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
341.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
341.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
338.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
337.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
335.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
334.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
334.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
333.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
330.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
330.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
324.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
324.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
321.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
313.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
312.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
308.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
302.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
300.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
296.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
296.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
292.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
291.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
290.6
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
288.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
284.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
279.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
277.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
273.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
270.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
259.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
259.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
256.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
251.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
248.3
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
247.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
245.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
235.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
232.8
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
230.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
228.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
226.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
223.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
198.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
198.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
198.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
197.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
193.4
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
183.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
173.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
170.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
169.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
167.1
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
164.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
162.6
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
155.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
154.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
148.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
136.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
134.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
130.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
128.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
120.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
115.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
115.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
94.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
89.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
82.2
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.