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AIFM3
COLON - Expression summary
RNA expressioni
HPA:18.7TPM
GTEx:14.0RPKM
FANTOM5:3.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 18.7
overview Male, age 54 Sample 1
TPM: 13.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 21.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 31.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 32.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 11
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 30.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 20.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 25.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 18.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 14.0
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 0.9
Samples: 149

Max RPKM: 15.3
Min RPKM: 0.1
Std RPKM: 1.9
Median RPKM: 0.5
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 15.3
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 11.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 9.7
GTEX-XBED-1726-SM-47JYO 60-69 years, male 9.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 5.4
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 5.0
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 4.7
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 4.7
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 3.6
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 2.0
Show all
Colon - Transverse
RPKM: 23.9
Samples: 196

Max RPKM: 60.6
Min RPKM: 0.1
Std RPKM: 17.6
Median RPKM: 26.6
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 60.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 58.1
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 54.3
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 54.2
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 54.1
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 53.8
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 51.6
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 50.5
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 50.1
GTEX-13111-0726-SM-5DUVE 50-59 years, male 49.9
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 3.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 5.7
FF:10014-101C5 62,83,84 years, mixed 3.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.