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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 537.9
Min RPKM: 26.1
Std RPKM: 112.3
Median RPKM: 232.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
537.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
499.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
476.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
453.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
423.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
411.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
393.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
387.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
381.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
371.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
370.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
369.1
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
368.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
367.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
362.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
362.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
357.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
354.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
347.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
346.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
346.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
343.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
342.7
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
342.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
337.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
332.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
330.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
330.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
322.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
319.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
319.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
317.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
309.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
307.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
307.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
302.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
299.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
299.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
288.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
283.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
282.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
274.7
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
274.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
271.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
267.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
267.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
267.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
266.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
265.8
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
262.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
253.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
250.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
249.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
249.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
241.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
240.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
236.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
233.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
232.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
224.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
221.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
221.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
218.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
217.0
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
214.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
212.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
211.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
210.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
205.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
204.2
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
201.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
201.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
188.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
188.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
186.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
182.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
180.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
179.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
178.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
176.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
168.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
166.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
163.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
162.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
158.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
155.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
151.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
151.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
150.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
144.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
140.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
132.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
128.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
128.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
122.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
105.9
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
100.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
99.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
92.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
91.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
91.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
88.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
86.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
81.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
79.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
70.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
69.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
67.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
67.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
66.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
63.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
61.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
57.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
54.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
40.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
39.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
26.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.