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COLON - Expression summary
RNA expressioni
HPA:118.2TPM
GTEx:35.4RPKM
FANTOM5:101.6Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 118.2
overview Male, age 54 Sample 1
TPM: 143.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 156.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 130.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 135.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 115.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 108.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 141.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 105.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 86.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 122.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 102.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 112.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 76.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 35.4
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 30.5
Samples: 149

Max RPKM: 50.8
Min RPKM: 15.2
Std RPKM: 5.9
Median RPKM: 29.7
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 50.8
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 50.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 50.1
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 40.3
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 40.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 39.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 39.4
GTEX-145LS-2926-SM-5O99G 60-69 years, female 39.4
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 39.4
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 39.3
Show all
Colon - Transverse
RPKM: 39.1
Samples: 196

Max RPKM: 76.1
Min RPKM: 16.9
Std RPKM: 9.4
Median RPKM: 38.8
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 76.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 66.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 58.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 58.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 57.7
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 57.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 57.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 56.0
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 55.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 54.9
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 101.6
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 84.1
FF:10014-101C5 62,83,84 years, mixed 101.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.