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COLON - Expression summary
RNA expressioni
HPA:162.7TPM
GTEx:54.9RPKM
FANTOM5:382.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 162.7
overview Male, age 54 Sample 1
TPM: 157.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 216.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 213.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 147.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 121.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 142.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 194.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 139.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 133.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 150.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 242.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 154.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 100.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 54.9
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 46.8
Samples: 149

Max RPKM: 79.7
Min RPKM: 23.9
Std RPKM: 12.0
Median RPKM: 46.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 79.7
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 78.2
GTEX-13111-1926-SM-5GCOL 50-59 years, male 70.9
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 70.6
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 68.9
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 67.7
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 67.0
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 66.8
GTEX-XBED-1726-SM-47JYO 60-69 years, male 66.2
GTEX-12696-1926-SM-5EGJT 60-69 years, male 65.9
Show all
Colon - Transverse
RPKM: 61.0
Samples: 196

Max RPKM: 92.8
Min RPKM: 28.9
Std RPKM: 12.3
Median RPKM: 61.4
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 92.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 92.5
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 90.6
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 89.9
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 88.0
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 86.5
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 84.3
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 83.3
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 83.2
GTEX-R55G-1226-SM-48FDC 40-49 years, female 83.0
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 382.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 300.4
FF:10014-101C5 62,83,84 years, mixed 382.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.