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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1179.4
Min RPKM: 29.4
Std RPKM: 272.0
Median RPKM: 432.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
1179.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
942.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
931.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
919.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
892.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
884.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
876.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
850.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
848.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
839.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
829.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
825.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
823.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
806.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
799.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
791.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
778.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
774.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
762.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
756.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
755.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
751.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
747.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
740.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
728.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
720.2
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
709.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
689.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
689.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
683.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
668.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
667.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
657.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
643.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
643.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
642.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
641.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
631.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
628.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
609.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
602.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
597.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
584.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
579.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
565.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
563.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
557.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
538.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
524.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
514.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
506.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
505.0
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
492.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
479.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
464.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
459.2
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
456.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
450.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
432.8
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
422.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
415.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
401.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
398.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
384.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
383.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
373.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
359.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
359.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
354.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
344.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
340.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
326.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
319.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
303.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
300.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
290.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
281.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
279.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
279.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
275.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
267.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
264.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
261.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
257.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
248.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
246.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
245.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
244.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
235.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
230.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
227.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
206.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
206.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
198.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
183.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
181.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
180.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
147.5
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
145.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
126.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
123.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
92.4
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
91.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
90.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
85.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
82.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
71.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
69.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
61.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
56.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
53.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
48.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
47.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
46.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
44.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
36.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
29.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.