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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 65.2
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 74.7
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 46.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 94.2
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 71.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 74.3
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 85.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 105.6
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 123.2
Min RPKM: 14.1
Std RPKM: 18.9
Median RPKM: 56.9
GTEX-S32W-1926-SM-4AD63
50-59 years, female
123.2
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
117.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
112.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
107.8
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
104.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
97.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
97.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
96.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
95.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
94.5
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
93.7
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
90.9
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
88.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
87.9
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
84.3
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
83.3
GTEX-REY6-1226-SM-48FDR
60-69 years, male
81.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
80.6
GTEX-QEL4-1226-SM-447A4
50-59 years, male
80.4
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
80.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
79.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
79.2
GTEX-RU72-1426-SM-46MUF
50-59 years, female
77.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
76.5
GTEX-P78B-1326-SM-3P611
40-49 years, female
74.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
73.3
GTEX-R53T-0326-SM-48FEC
50-59 years, female
73.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
73.0
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
72.6
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
72.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
72.0
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
67.7
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
67.3
GTEX-Q734-0326-SM-48U15
40-49 years, female
66.9
GTEX-QESD-2026-SM-447BI
20-29 years, male
66.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
66.4
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
66.3
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
65.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
64.9
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
64.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
64.7
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
64.4
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
62.5
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
61.7
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
61.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
61.5
GTEX-X261-1726-SM-4PQYT
50-59 years, male
61.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
61.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
60.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
60.7
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
60.4
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
60.3
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
59.6
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
59.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
58.4
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
58.3
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
57.2
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
57.2
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
56.9
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
56.9
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
56.1
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
55.5
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
55.4
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
55.2
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
54.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
54.6
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
54.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
54.2
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
54.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
54.1
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
53.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
53.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
53.4
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
53.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
53.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
52.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
52.3
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
52.2
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
52.1
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
51.7
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
51.3
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
50.6
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
50.5
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
50.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
50.4
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
50.3
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
50.3
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
50.0
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
49.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
49.6
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
49.2
GTEX-YECK-1926-SM-4W21H
60-69 years, male
49.0
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
48.7
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
48.2
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
46.5
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
46.3
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
46.2
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
46.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
45.8
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
44.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
44.4
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
44.2
GTEX-11GSP-0626-SM-5986T
60-69 years, female
43.3
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
43.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
43.0
GTEX-13112-1426-SM-5EGH8
50-59 years, male
42.4
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
42.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
41.3
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
41.1
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
41.0
GTEX-RN64-1826-SM-48FDV
50-59 years, male
40.1
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
39.7
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
39.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
39.2
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
37.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
36.1
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
35.4
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
35.1
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
14.1
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
