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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 75.2
Min RPKM: 6.7
Std RPKM: 11.3
Median RPKM: 28.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
75.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
63.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
61.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
50.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
49.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
46.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
42.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
41.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
40.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
40.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
40.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
39.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
39.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
39.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
39.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
38.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
38.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
38.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
38.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
38.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
37.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
37.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
37.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
37.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
37.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
37.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
37.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
37.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
37.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
36.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
36.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
36.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
36.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
36.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
35.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
35.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
34.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
34.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
34.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
34.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
33.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
32.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
32.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
32.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
32.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
31.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
31.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
31.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
31.1
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
31.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
31.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
30.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
30.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
30.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
29.3
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
29.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
28.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
28.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
28.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
28.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
27.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
27.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
27.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
27.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
27.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
26.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
26.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
26.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
26.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
26.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
26.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
25.1
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
25.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
24.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
23.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
23.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
23.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
23.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
23.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
23.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
23.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
22.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
22.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
22.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
22.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
21.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
20.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
20.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
20.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
20.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
20.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
20.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
19.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
19.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
19.3
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
18.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
17.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
17.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
16.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
16.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
15.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
15.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
15.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
15.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
15.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
14.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
13.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
13.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
12.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
12.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
11.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
10.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
10.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
10.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
9.2
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
9.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
6.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.