We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 513.5
Min RPKM: 77.6
Std RPKM: 109.5
Median RPKM: 237.5
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
513.5
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
513.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
458.9
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
441.2
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
440.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
439.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
432.6
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
410.9
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
392.2
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
384.7
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
382.0
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
381.5
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
351.3
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
350.4
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
347.2
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
340.6
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
337.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
335.1
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
332.8
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
329.0
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
327.3
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
324.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
323.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
321.1
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
317.2
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
313.9
GTEX-11I78-2026-SM-5987C
50-59 years, female
313.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
313.6
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
311.3
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
310.1
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
299.0
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
295.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
295.5
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
292.4
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
287.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
284.8
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
284.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
277.3
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
274.3
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
265.4
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
260.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
254.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
251.6
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
250.4
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
250.0
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
247.2
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
242.7
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
237.8
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
237.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
236.9
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
225.3
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
223.8
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
218.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
204.5
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
203.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
202.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
191.0
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
190.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
183.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
182.3
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
180.9
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
176.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
169.5
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
164.1
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
161.2
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
160.4
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
153.2
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
152.7
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
151.1
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
149.4
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
143.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
142.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
140.3
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
138.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
135.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
129.4
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
126.8
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
125.6
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
121.7
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
115.6
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
114.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
113.1
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
108.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
105.0
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
104.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
102.4
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
101.5
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
99.6
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
98.7
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
97.6
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
97.1
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
94.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
94.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
85.2
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
77.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
77.6
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.