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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 687.5
Min RPKM: 53.7
Std RPKM: 118.0
Median RPKM: 223.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
687.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
686.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
646.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
492.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
487.4
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
442.2
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
411.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
410.6
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
407.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
367.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
361.4
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
361.3
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
354.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
348.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
346.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
339.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
338.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
335.5
GTEX-Q734-0226-SM-48U1A
40-49 years, female
332.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
330.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
329.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
329.1
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
325.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
325.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
324.9
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
323.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
320.5
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
311.5
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
308.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
304.2
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
301.6
GTEX-13111-0126-SM-5EGHO
50-59 years, male
299.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
293.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
288.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
282.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
279.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
275.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
269.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
268.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
265.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
254.6
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
253.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
249.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
249.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
249.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
243.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
242.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
240.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
237.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
230.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
227.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
227.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
220.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
218.9
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
216.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
215.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
215.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
213.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
212.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
211.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
211.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
210.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
208.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
205.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
197.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
197.2
GTEX-PX3G-0926-SM-48U12
20-29 years, female
196.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
196.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
195.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
193.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
193.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
187.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
184.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
181.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
180.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
178.8
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
177.0
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
175.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
174.6
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
173.6
GTEX-QV31-0126-SM-447BP
30-39 years, male
171.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
169.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
150.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
147.2
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
146.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
146.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
138.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
133.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
131.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
130.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
128.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
125.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
120.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
118.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
116.1
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
108.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
104.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
99.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
88.5
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
84.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
84.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
83.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
81.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
53.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.