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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 860.6
Min RPKM: 148.3
Std RPKM: 139.2
Median RPKM: 373.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
860.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
679.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
645.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
642.3
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
638.4
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
611.0
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
597.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
596.3
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
570.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
568.6
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
559.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
558.7
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
550.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
525.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
520.6
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
518.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
517.3
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
515.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
502.5
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
497.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
491.1
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
489.9
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
486.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
485.5
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
485.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
484.8
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
483.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
481.2
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
476.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
453.1
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
449.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
448.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
435.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
433.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
429.2
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
419.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
410.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
407.7
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
403.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
400.4
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
395.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
394.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
389.3
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
388.6
GTEX-S341-0726-SM-4AD5R
40-49 years, female
387.4
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
387.1
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
380.0
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
378.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
373.9
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
373.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
364.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
360.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
355.8
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
355.5
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
348.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
343.0
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
332.2
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
332.1
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
322.7
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
318.6
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
315.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
311.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
309.6
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
306.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
302.7
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
300.7
GTEX-11I78-1926-SM-59878
50-59 years, female
300.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
297.8
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
290.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
289.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
285.3
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
283.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
272.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
271.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
270.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
265.8
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
258.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
253.3
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
247.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
243.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
238.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
228.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
220.6
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
218.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
214.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
208.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
206.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
204.7
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
203.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
195.8
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
191.1
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
183.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
182.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
181.8
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
169.6
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
157.4
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
148.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.