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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 340.4
Min RPKM: 0.0
Std RPKM: 85.4
Median RPKM: 65.4
GTEX-111YS-1426-SM-5GID8
60-69 years, male
340.4
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
317.0
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
294.0
GTEX-ZTSS-0926-SM-59865
40-49 years, male
263.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
261.6
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
249.2
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
229.9
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
229.8
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
224.9
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
211.5
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
208.1
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
201.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
199.9
GTEX-1122O-1326-SM-5H11F
60-69 years, female
189.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
177.0
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
168.5
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
162.9
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
158.7
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
158.5
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
156.7
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
155.3
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
155.1
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
151.1
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
146.9
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
136.6
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
133.2
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
127.8
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
124.8
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
109.2
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
109.2
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
105.4
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
102.9
GTEX-13113-1226-SM-5EGHT
60-69 years, female
101.8
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
101.3
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
94.2
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
93.9
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
85.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
85.1
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
83.3
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
75.8
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
74.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
73.7
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
70.7
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
68.0
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
62.8
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
62.0
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
61.2
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
57.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
54.7
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
54.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
53.0
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
51.8
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
51.1
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
49.0
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
41.6
GTEX-13O61-1326-SM-5KM31
60-69 years, male
39.4
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
38.3
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
37.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
35.1
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
30.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
30.4
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
29.5
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
25.6
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
17.4
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
15.1
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
10.9
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
10.5
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
9.8
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
9.3
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
8.2
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
8.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
7.6
GTEX-117YX-0326-SM-5GICL
50-59 years, male
2.9
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
2.4
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
2.4
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
2.3
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
2.1
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
2.0
GTEX-1192X-2526-SM-59868
50-59 years, male
0.5
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.5
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
0.5
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
0.4
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
0.4
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
0.3
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.2
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
0.0
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
0.0
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.0
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
