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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 108.5
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 177.7
Min RPKM: 67.9
Std RPKM: 19.1
Median RPKM: 115.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
177.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
173.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
160.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
159.4
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
146.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
144.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
143.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
143.7
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
143.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
143.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
139.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
139.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
137.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
136.6
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
135.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
134.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
134.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
132.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
131.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
131.3
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
130.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
130.0
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
129.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
129.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
129.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
129.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
128.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
128.4
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
128.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
127.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
127.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
126.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
125.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
124.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
123.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
123.0
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
123.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
122.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
121.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
120.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
120.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
120.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
120.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
119.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
119.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
119.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
119.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
118.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
118.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
118.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
118.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
117.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
117.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
117.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
116.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
116.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
116.4
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
115.0
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
114.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
114.1
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
113.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
112.1
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
111.5
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
110.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
110.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
110.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
110.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
110.2
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
109.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
109.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
108.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
108.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
108.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
108.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
107.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
107.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
107.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
107.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
107.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
106.9
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
106.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
105.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
105.4
GTEX-144FL-3026-SM-5O99C
50-59 years, male
105.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
104.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
104.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
103.7
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
103.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
102.9
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
102.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
101.6
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
100.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
100.8
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
100.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
99.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
99.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
99.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
98.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
98.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
98.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
97.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
96.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
95.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
94.1
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
92.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
91.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
82.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
80.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
79.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
79.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
78.5
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
75.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
74.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
67.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 117.7
Samples: 108
Max RPKM: 225.0
Min RPKM: 60.4
Std RPKM: 26.7
Median RPKM: 115.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
225.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
193.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
191.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
178.2
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
176.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
171.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
164.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
157.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
155.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
152.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
151.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
150.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
144.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
143.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
143.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
141.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
140.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
138.9
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
136.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
135.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
134.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
131.6
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
131.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
129.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
129.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
127.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
127.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
126.7
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
126.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
126.5
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
126.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
125.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
124.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
124.6
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
123.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
122.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
122.4
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
122.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
122.1
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
121.8
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
120.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
120.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
120.1
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
119.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
119.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
119.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
119.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
118.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
117.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
117.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
116.8
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
116.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
116.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
115.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
115.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
114.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
114.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
112.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
112.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
111.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
111.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
111.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
111.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
110.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
110.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
110.6
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
108.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
108.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
107.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
107.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
107.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
106.6
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
106.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
106.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
105.7
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
104.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
104.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
104.2
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
104.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
103.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
103.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
103.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
103.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
102.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
101.8
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
100.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
100.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
100.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
98.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
97.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
96.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
96.5
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
95.5
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
95.1
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
93.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
92.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
92.3
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
90.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
87.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
86.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
81.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
80.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
72.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
69.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
67.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
67.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
64.0
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
60.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.