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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 315.5
Min RPKM: 3.3
Std RPKM: 82.8
Median RPKM: 69.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
315.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
310.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
295.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
295.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
280.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
265.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
253.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
251.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
238.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
233.6
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
225.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
222.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
209.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
206.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
205.5
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
199.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
197.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
189.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
183.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
166.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
166.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
165.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
157.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
135.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
131.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
128.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
114.7
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
114.6
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
112.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
111.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
110.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
108.5
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
108.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
107.6
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
101.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
100.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
95.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
88.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
87.6
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
85.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
83.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
81.4
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
80.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
79.4
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
74.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
72.4
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
70.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
69.2
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
67.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
61.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
60.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
60.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
60.2
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
59.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
56.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
55.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
54.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
54.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
53.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
52.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
50.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
45.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
43.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
41.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
41.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
41.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
38.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
35.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
35.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
34.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
34.8
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
34.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
32.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
32.6
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
32.0
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
30.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
29.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
28.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
28.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
26.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
23.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
23.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
20.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
16.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
14.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
13.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
13.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
13.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
10.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
9.7
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
8.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
8.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
7.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
3.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.