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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 314.7
Min RPKM: 9.6
Std RPKM: 61.3
Median RPKM: 90.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
314.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
264.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
236.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
224.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
219.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
218.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
202.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
202.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
198.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
188.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
183.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
180.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
178.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
176.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
171.9
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
167.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
162.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
153.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
151.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
149.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
148.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
145.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
145.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
144.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
144.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
143.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
140.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
140.1
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
136.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
135.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
129.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
128.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
127.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
127.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
127.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
126.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
125.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
123.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
122.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
122.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
118.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
116.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
115.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
112.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
105.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
105.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
104.6
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
103.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
102.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
100.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
97.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
96.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
94.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
94.4
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
94.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
93.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
93.0
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
91.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
90.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
88.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
88.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
86.1
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
83.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
81.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
75.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
75.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
74.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
69.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
68.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
66.8
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
66.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
64.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
63.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
63.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
63.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
60.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
59.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
58.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
58.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
53.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
53.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
52.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
51.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
50.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
49.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
48.5
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
47.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
47.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
47.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
44.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
41.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
40.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
37.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
36.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
35.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
35.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
33.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
33.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
31.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
31.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
29.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
27.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
27.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
27.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
26.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
24.9
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
23.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
23.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
22.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
21.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
20.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
18.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
17.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
15.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
13.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
11.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
9.6
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.